BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E02LP1|AL430394
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1784 0.0
>3x_Contig1305
Length = 9229
Score = 1784 bits (900), Expect = 0.0
Identities = 903/904 (99%)
Strand = Plus / Minus
Query: 1 atgtgaaaagactcatctcatccatcgaagaccctgatacaaaggttctcttgcttgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5361 atgtgaaaagactcatctcatccatcgaagaccctgatacaaaggttctcttgcttgaaa 5302
Query: 61 aactgggtgcgagttccacccaagatttgacatttctttacgagtactataaagctaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5301 aactgggtgcgagttccacccaagatttgacatttctttacgagtactataaagctaaac 5242
Query: 121 ttactgttttgaacagcaagctaatagaaagttccaatttaccaattacggagtacatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5241 ttactgttttgaacagcaagctaatagaaagttccaatttaccaattacggagtacatta 5182
Query: 181 ccaacatgacatataacaagtctcctttcaaagagtatttgaaaaataagctgggtgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5181 ccaacatgacatataacaagtctcctttcaaagagtatttgaaaaataagctgggtgaga 5122
Query: 241 aaaaggaatatgagggttgcttcgatgtagggaccaagcttctgaaaatagaaaaggctt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5121 aaagggaatatgagggttgcttcgatgtagggaccaagcttctgaaaatagaaaaggctt 5062
Query: 301 taaatataaaagaaggttctattattgatgatatcgatgcttctttcgttctacgaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5061 taaatataaaagaaggttctattattgatgatatcgatgcttctttcgttctacgaatca 5002
Query: 361 tgatcacagatatcagtgtattaaaggaaaagatcgggttcgaaaaactacttgatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5001 tgatcacagatatcagtgtattaaaggaaaagatcgggttcgaaaaactacttgatatat 4942
Query: 421 atttatcacggaatgattttgctacggtggagtccttgttacaagccaacgataaggtag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4941 atttatcacggaatgattttgctacggtggagtccttgttacaagccaacgataaggtag 4882
Query: 481 tgctgaaagttatcgatcactatctaagtctcaacaatactagggtcattagtcaattcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4881 tgctgaaagttatcgatcactatctaagtctcaacaatactagggtcattagtcaattcc 4822
Query: 541 ttaacaagaatacgtgttgtataaacgactctgggctacttatagaaattttggaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4821 ttaacaagaatacgtgttgtataaacgactctgggctacttatagaaattttggaaaaaa 4762
Query: 601 tacccccaaccattcaaatatcagtgttatcgggtttcctatttccgttactcagacgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4761 tacccccaaccattcaaatatcagtgttatcgggtttcctatttccgttactcagacgaa 4702
Query: 661 aagacgaatcaacatataatctacagattaagaaaggaattttaaggcatcgtactcaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4701 aagacgaatcaacatataatctacagattaagaaaggaattttaaggcatcgtactcaga 4642
Query: 721 atataaacaatatcgaacgttgtttagaactgtgaaatagtgtgatatatcattaagtgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4641 atataaacaatatcgaacgttgtttagaactgtgaaatagtgtgatatatcattaagtgc 4582
Query: 781 attgtgaaaatatatacatgaaaaatagaggttaatcttgtctataggcgatctggcttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4581 attgtgaaaatatatacatgaaaaatagaggttaatcttgtctataggcgatctggcttg 4522
Query: 841 taatcaagctgtcaattcagagactggtgccaaaccggaacagactttttgcaaaagttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4521 taatcaagctgtcaattcagagactggtgccaaaccggaacagactttttgcaaaagttc 4462
Query: 901 tttt 904
||||
Sbjct: 4461 tttt 4458
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8080
Number of Sequences: 1807
Number of extensions: 8080
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)